SeuratExplorer

Upload Data

Choose A Seurat .rds file:

Browse...

Metadata of Cells

Dimension Reduction Plot

Settings

Change Cluster Order

Show cluster label

Label Size:

Point Size

Adjust H/W Ratio of DimPlot

Visualize 'features' on a dimensional reduction plot

Settings

Gene Symbol:

Show Cluster Label

Label Size:

Pick Color for lowest expression:

Pick Color for highest expression:

Point Size:

Adjust Height/Width Ratio:

Single cell violin plot

Settings

Gene Symbols:

Change Cluster Order

Split Plot

Stack Plot

Flip Plot

Color By:

Point Size:

Point Alpha:

x Axis Label Size:

Y Axis Label Size:

Adjust Height/Width Ratio:

Dot plot visualization

Settings

Gene Symbols:

Change Cluster Order

Cluster Idents

Rotate Axis

Flip Coordinate

Pick Color for lowest expression:

Pick Color for highest expression:

Dot Scale:

x Axis Label Size:

Y Axis Label Size:

Adjust Height/Width Ratio:

Feature expression heatmap

Settings

Gene Symbols:

Change Cluster Order

Cluster Text Size:

Cluster Text Hjust:

Cluster Text Vjust:

Cluster Text Rotate Angle:

Cluster Group Bar Height:

Line Width:

Feature Text Size:

Adjust Height/Width Ratio:

Single cell ridge plot

Settings

Gene Symbols:

Change Cluster Order

Number of columns:

Stack Plot

Color By:

x Axis Label Size:

Y Axis Label Size:

Adjust Height/Width Ratio:

WARNING：

Find Markers for All Clusters

Find DEGs by Customized Groups Within Selected Clusters

Modify the following parameters If you want to subset cells, otherwise ignore it.

Set Parameters

Logfc Threshold:

Test use:

Minimum Expression Percentage:

Minimum Expression Percentage Difference:

Upload Data

Metadata of Cells

Dimension Reduction Plot

Settings

Change Cluster Order

Visualize 'features' on a dimensional reduction plot

Settings

Single cell violin plot

Settings

Change Cluster Order

Dot plot visualization

Settings

Change Cluster Order

Feature expression heatmap

Settings

Change Cluster Order

Single cell ridge plot

Settings

Change Cluster Order

WARNING：

Find Markers for All Clusters

Find DEGs by Customized Groups Within Selected Clusters

Modify the following parameters If you want to subset cells, otherwise ignore it.

Set Parameters

Analysis Results: